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CAZyme Gene Cluster: MGYG000002458_1|CGC2

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CGC gene composition diagram | Gene composition table | Substrate predicted by eCAMI subfamily  |  Substrate predicted by dbCAN-PUL search  |  Genomic context 

CGC gene composition diagram

Gene composition table

Protein ID Protein Name Type Start End Strand Signature
MGYG000002458_00088
Pectate disaccharide-lyase
CAZyme 94348 96015 + PL2_2| PL2
MGYG000002458_00089
Lactose transport system permease protein LacF
TC 96056 96946 + 3.A.1.1.11
MGYG000002458_00090
L-arabinose transport system permease protein AraQ
TC 96939 97859 + 3.A.1.1.11
MGYG000002458_00091
Trehalose import ATP-binding protein SugC
TC 97873 99000 + 3.A.1.1.11
MGYG000002458_00092
Putative ABC transporter substrate-binding protein YesO
TC 99016 100305 + 3.A.1.1.11
MGYG000002458_00093
Oligogalacturonate-specific porin KdgM
TC 100618 101316 + 1.B.35.1.1
MGYG000002458_00094
Inner membrane protein YdjM
null 101605 102153 + YdjM
MGYG000002458_00095
L-cystine uptake protein TcyP
TC 102371 103762 + 2.A.23.1.8
MGYG000002458_00096
N-acetylmuramoyl-L-alanine amidase AmiD
null 103832 104692 - Amidase_2| PG_binding_1
MGYG000002458_00097
Pectin degradation repressor protein KdgR
TF 104943 105734 - TrmB
MGYG000002458_00098
Oligogalacturonate lyase
CAZyme 105921 107087 - PL22| PL22_1
MGYG000002458_00099
Riboflavin transporter RibZ
TC 107374 108741 + 2.A.1.3.17
MGYG000002458_00100
Protease HtpX
TC 108811 109692 - 9.B.1.1.6
MGYG000002458_00101
Tail-specific protease
TC 110020 112086 - 9.B.174.1.2
Protein ID Protein Name Type Start End Strand Signature

Substrate predicted by eCAMI subfamilies is pectin

Protein ID eCAMI subfam CAZyme substrate
MGYG000002458_00088 PL2_e0|4.2.2.9 pectin
MGYG000002458_00098 PL22_e0|4.2.2.6 pectin

Substrate predicted by dbCAN-PUL is pectin download this fig


Genomic location